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Citation Profile [Updated: 2020-06-03 07:38:54]
5 Years H
9
Impact Factor
0.07
5 Years IF
0.06
Data available in this report

[Raw data] [50 most cited papers] [50 most relevant papers] [cites used to compute IF] [Recent citations ][Frequent citing series ] [more data in EconPapers] [trace new citations] [Missing citations? Add them now] [Incorrect content? Let us know]

Main indicators
Raw Data

 

IF AIF CIF IF5 DOC CDO CIT NCI CCU D2Y C2Y D5Y C5Y SC %SC CiY II AII
1990 0 0.08 0 0 0 0 0 0 0 0 0 0 0.04
1991 0 0.08 0 0 0 0 0 0 0 0 0 0 0.04
1992 0 0.09 0 0 0 0 0 0 0 0 0 0 0.04
1993 0 0.1 0 0 0 0 0 0 0 0 0 0 0.05
1994 0 0.11 0 0 0 0 0 0 0 0 0 0 0.06
1995 0 0.2 0 0 0 0 0 0 0 0 0 0 0.08
1996 0 0.22 0 0 0 0 0 0 0 0 0 0 0.1
1997 0 0.23 0 0 0 0 0 0 0 0 0 0 0.1
1998 0 0.27 0 0 0 0 0 0 0 0 0 0 0.12
1999 0 0.29 0 0 0 0 0 0 0 0 0 0 0.14
2000 0 0.34 0 0 0 0 0 0 0 0 0 0 0.15
2001 0 0.36 0 0 0 0 0 0 0 0 0 0 0.16
2002 0 0.4 0 0 0 0 0 0 0 0 0 0 0.21
2003 0 0.41 0 0 0 0 0 0 0 0 0 0 0.2
2004 0 0.46 0 0 0 0 0 0 0 0 0 0 0.21
2005 0 0.47 0 0 21 21 34 0 0 0 0 0 0.22
2006 0.24 0.47 0.09 0.24 57 78 85 7 7 21 5 21 5 7 100 2 0.04 0.21
2007 0.19 0.42 0.16 0.19 88 166 101 27 34 78 15 78 15 27 100 6 0.07 0.19
2008 0.13 0.45 0.11 0.13 115 281 145 30 64 145 19 166 21 27 90 4 0.03 0.21
2009 0.13 0.44 0.11 0.11 155 436 133 46 110 203 26 281 32 46 100 3 0.02 0.21
2010 0.12 0.44 0.11 0.1 169 605 157 65 175 270 32 436 43 62 95.4 6 0.04 0.18
2011 0.11 0.46 0.11 0.1 183 788 151 89 264 324 36 584 59 77 86.5 8 0.04 0.21
2012 0.12 0.47 0.12 0.11 206 994 90 118 382 352 42 710 75 104 88.1 12 0.06 0.19
2013 0.1 0.53 0.11 0.11 244 1238 90 142 524 389 37 828 87 124 87.3 2 0.01 0.22
2014 0.08 0.55 0.11 0.1 278 1516 110 163 687 450 37 957 92 151 92.6 7 0.03 0.21
2015 0.05 0.55 0.05 0.05 297 1813 83 93 780 522 27 1080 52 88 94.6 3 0.01 0.21
2016 0.05 0.56 0.05 0.05 281 2094 62 112 892 575 31 1208 57 104 92.9 6 0.02 0.2
2017 0.06 0.58 0.06 0.05 318 2412 46 134 1026 578 35 1306 66 124 92.5 6 0.02 0.21
2018 0.05 0.7 0.05 0.04 291 2703 22 126 1152 599 27 1418 60 108 85.7 1 0 0.28
2019 0.07 0.88 0.06 0.06 355 3058 5 188 1340 609 43 1465 82 174 92.6 2 0.01 0.33
IF: Impact Factor: C2Y / D2Y
AIF: Average Impact Factor for series in RePEc in year y
CIF: Cumulative impact factor
IF5: Impact Factor: C5Y / D5Y
DOC: Number of documents published in year y
CDO: Cumulative number of documents published until year y
CIT: Number of citations to papers published in year y
NCI: Number of citations in year y
CCU: Cumulative number of citations to papers published until year y
D2Y: Number of articles published in y-1 plus y-2
C2Y: Cites in y to articles published in y-1 plus y-2
D5Y: Number of articles published in y-1 until y-5
C5Y: Cites in y to articles published in y-1 until y-5
SC: selft citations in y to articles published in y-1 plus y-2
%SC: Percentage of selft citations in y to articles published in y-1 plus y-2
CiY: Cites in year y to documents published in year y
II: Immediacy Index: CiY / Documents.
AII: Average Immediacy Index for series in RePEc in year y
50 most cited documents in this series
#YearTitleCited
12007Universally Sloppy Parameter Sensitivities in Systems Biology Models. (2007). Sethna, James P ; Myers, Christopher R ; Brown, Kevin S ; Casey, Fergal P ; Waterfall, Joshua J ; Gutenkunst, Ryan N. In: PLOS Computational Biology. RePEc:plo:pcbi00:0030189.

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25
22006Cooperation Prevails When Individuals Adjust Their Social Ties. (2006). Lenaerts, Tom ; Pacheco, Jorge M ; Santos, Francisco C. In: PLOS Computational Biology. RePEc:plo:pcbi00:0020140.

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20
32008The Dynamic Brain: From Spiking Neurons to Neural Masses and Cortical Fields. (2008). Friston, Karl ; Breakspear, Michael ; Robinson, Peter A ; Jirsa, Viktor K ; Deco, Gustavo. In: PLOS Computational Biology. RePEc:plo:pcbi00:1000092.

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18
42005Ten Simple Rules for Getting Published. (2005). Bourne, Philip E. In: PLOS Computational Biology. RePEc:plo:pcbi00:0010057.

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14
52010Evolutionary Establishment of Moral and Double Moral Standards through Spatial Interactions. (2010). Szabo, Gyorgy ; Perc, Matja ; Szolnoki, Attila ; Helbing, Dirk. In: PLOS Computational Biology. RePEc:plo:pcbi00:1000758.

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11
62007Ten Simple Rules for a Successful Collaboration. (2007). Bourne, Philip E ; Vicens, Quentin. In: PLOS Computational Biology. RePEc:plo:pcbi00:0030044.

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10
72006Complex Parameter Landscape for a Complex Neuron Model. (2006). de Schutter, Erik ; Achard, Pablo. In: PLOS Computational Biology. RePEc:plo:pcbi00:0020094.

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9
82007Ten Simple Rules for Making Good Oral Presentations. (2007). Bourne, Philip E. In: PLOS Computational Biology. RePEc:plo:pcbi00:0030077.

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9
92012Impact of Network Structure and Cellular Response on Spike Time Correlations. (2012). Josi, Kreimir ; Shea-Brown, Eric ; Hu, YU ; Trousdale, James. In: PLOS Computational Biology. RePEc:plo:pcbi00:1002408.

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9
102008Integrated Information in Discrete Dynamical Systems: Motivation and Theoretical Framework. (2008). Tononi, Giulio ; BALDUZZI, DAVID . In: PLOS Computational Biology. RePEc:plo:pcbi00:1000091.

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8
112011From Spiking Neuron Models to Linear-Nonlinear Models. (2011). Brunel, Nicolas ; Ostojic, Srdjan . In: PLOS Computational Biology. RePEc:plo:pcbi00:1001056.

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8
122008Transient Cognitive Dynamics, Metastability, and Decision Making. (2008). Afraimovich, Valentin S ; Varona, Pablo ; Huerta, Ramon ; Rabinovich, Mikhail I. In: PLOS Computational Biology. RePEc:plo:pcbi00:1000072.

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8
132006Ten Simple Rules for Getting Grants. (2006). Chalupa, Leo M ; Bourne, Philip E. In: PLOS Computational Biology. RePEc:plo:pcbi00:0020012.

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8
142011How Structure Determines Correlations in Neuronal Networks. (2011). Rotter, Stefan ; Cardanobile, Stefano ; Staude, Benjamin ; Pernice, Volker. In: PLOS Computational Biology. RePEc:plo:pcbi00:1002059.

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8
152010Associating Genes and Protein Complexes with Disease via Network Propagation. (2010). Sharan, Roded ; Shlomi, Tomer ; Ruppin, Eytan ; Magger, Oded ; Vanunu, Oron. In: PLOS Computational Biology. RePEc:plo:pcbi00:1000641.

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8
162006Mathematical Modeling Identifies Inhibitors of Apoptosis as Mediators of Positive Feedback and Bistability. (2006). Herzel, Hanspeter ; Bluthgen, Nils ; Legewie, Stefan. In: PLOS Computational Biology. RePEc:plo:pcbi00:0020120.

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8
172011Inference for Nonlinear Epidemiological Models Using Genealogies and Time Series. (2011). Koelle, Katia ; Ratmann, Oliver ; Rasmussen, David A. In: PLOS Computational Biology. RePEc:plo:pcbi00:1002136.

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7
182010Parameter Estimation and Model Selection in Computational Biology. (2010). Khammash, Mustafa ; Lillacci, Gabriele. In: PLOS Computational Biology. RePEc:plo:pcbi00:1000696.

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6
192011Second Order Dimensionality Reduction Using Minimum and Maximum Mutual Information Models. (2011). Sharpee, Tatyana O ; Sincich, Lawrence C ; Rowekamp, Ryan J ; Fitzgerald, Jeffrey D. In: PLOS Computational Biology. RePEc:plo:pcbi00:1002249.

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6
202009Population Structure Induces a Symmetry Breaking Favoring the Emergence of Cooperation. (2009). Santos, Francisco C ; Pinheiro, Flavio L ; Pacheco, Jorge M. In: PLOS Computational Biology. RePEc:plo:pcbi00:1000596.

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6
212008Stimulus Design for Model Selection and Validation in Cell Signaling. (2008). Tidor, Bruce ; White, Forest M ; Endy, Drew ; Toettcher, Jared E ; Apgar, Joshua F. In: PLOS Computational Biology. RePEc:plo:pcbi00:0040030.

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6
222013Ten Simple Rules for Reproducible Computational Research. (2013). Hovig, Eivind ; Taylor, James ; Nekrutenko, Anton ; Sandve, Geir Kjetil. In: PLOS Computational Biology. RePEc:plo:pcbi00:1003285.

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6
232011Simulation of the Undiseased Human Cardiac Ventricular Action Potential: Model Formulation and Experimental Validation. (2011). Rudy, Yoram ; Varro, Andras ; Virag, Laszlo ; O'Hara, Thomas. In: PLOS Computational Biology. RePEc:plo:pcbi00:1002061.

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6
242006Ten Simple Rules for Selecting a Postdoctoral Position. (2006). Friedberg, Iddo ; Bourne, Philip E. In: PLOS Computational Biology. RePEc:plo:pcbi00:0020121.

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6
252005Molecular Switches at the Synapse Emerge from Receptor and Kinase Traffic. (2005). Bhalla, Upinder S ; Hayer, Arnold. In: PLOS Computational Biology. RePEc:plo:pcbi00:0010020.

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6
262012Decorrelation of Neural-Network Activity by Inhibitory Feedback. (2012). Diesmann, Markus ; Einevoll, Gaute T ; Helias, Moritz ; Tetzlaff, Tom. In: PLOS Computational Biology. RePEc:plo:pcbi00:1002596.

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6
272007Machine Learning and Its Applications to Biology. (2007). Drghici, Sorin ; Romero, Roberto ; Chen, Xue-Wen ; Carey, Vincent J ; Tarca, Adi L. In: PLOS Computational Biology. RePEc:plo:pcbi00:0030116.

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6
282010Probability Matching as a Computational Strategy Used in Perception. (2010). Shams, Ladan ; Beierholm, Ulrik R ; Wozny, David R. In: PLOS Computational Biology. RePEc:plo:pcbi00:1000871.

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6
292014VBA: A Probabilistic Treatment of Nonlinear Models for Neurobiological and Behavioural Data. (2014). Rigoux, Lionel ; Adam, Vincent ; Daunizeau, Jean. In: PLOS Computational Biology. RePEc:plo:pcbi00:1003441.

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6
302008Support Vector Machines and Kernels for Computational Biology. (2008). Ratsch, Gunnar ; Scholkopf, Bernhard ; Sonnenburg, Soren ; Ong, Cheng Soon ; Ben-Hur, Asa. In: PLOS Computational Biology. RePEc:plo:pcbi00:1000173.

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6
312011Ten Simple Rules for Building and Maintaining a Scientific Reputation. (2011). Barbour, Virginia ; Bourne, Philip E. In: PLOS Computational Biology. RePEc:plo:pcbi00:1002108.

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5
322010Disentangling Direct from Indirect Co-Evolution of Residues in Protein Alignments. (2010). van Nimwegen, Erik ; Burger, Lukas. In: PLOS Computational Biology. RePEc:plo:pcbi00:1000633.

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5
332015Combining Search, Social Media, and Traditional Data Sources to Improve Influenza Surveillance. (2015). Brownstein, John S ; Nsoesie, Elaine O ; Paul, Michael J ; Dredze, Mark ; Nguyen, Andre T ; Santillana, Mauricio. In: PLOS Computational Biology. RePEc:plo:pcbi00:1004513.

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5
342006The Ion Channel Inverse Problem: Neuroinformatics Meets Biophysics. (2006). D'Alessandro, Giampaolo ; Cannon, Robert C. In: PLOS Computational Biology. RePEc:plo:pcbi00:0020091.

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5
352010Comparing Families of Dynamic Causal Models. (2010). Schofield, Thomas M ; Friston, Karl J ; Rosa, Maria J ; Daunizeau, Jean ; Stephan, Klaas E ; Penny, Will D ; Leff, Alex P. In: PLOS Computational Biology. RePEc:plo:pcbi00:1000709.

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5
362007Signal Propagation in Proteins and Relation to Equilibrium Fluctuations. (2007). Bahar, Ivet ; Chennubhotla, Chakra. In: PLOS Computational Biology. RePEc:plo:pcbi00:0030172.

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5
372008Ten Simple Rules for Aspiring Scientists in a Low-Income Country. (2008). Gutierrez, Jose-Maria ; Moreno, Edgardo. In: PLOS Computational Biology. RePEc:plo:pcbi00:1000024.

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5
382009Fuzzy Logic Analysis of Kinase Pathway Crosstalk in TNF/EGF/Insulin-Induced Signaling. (2009). Lauffenburger, Douglas A ; Sorger, Peter K ; Muhlich, Jeremy L ; Saez-Rodriguez, Julio ; Aldridge, Bree B. In: PLOS Computational Biology. RePEc:plo:pcbi00:1000340.

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5
392010Dynamics and Control of Diseases in Networks with Community Structure. (2010). Jones, James H ; Salathe, Marcel. In: PLOS Computational Biology. RePEc:plo:pcbi00:1000736.

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5
402005PhyloGibbs: A Gibbs Sampling Motif Finder That Incorporates Phylogeny. (2005). van Nimwegen, Erik ; Siggia, Eric D ; Siddharthan, Rahul. In: PLOS Computational Biology. RePEc:plo:pcbi00:0010067.

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5
412011A Role for Both Conformational Selection and Induced Fit in Ligand Binding by the LAO Protein. (2011). Huang, Xuhui ; Sosa-Peinado, Alejandro ; Bowman, Gregory R ; Silva, Daniel-Adriano. In: PLOS Computational Biology. RePEc:plo:pcbi00:1002054.

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5
422014Comparison of Filtering Methods for the Modeling and Retrospective Forecasting of Influenza Epidemics. (2014). Shaman, Jeffrey ; Karspeck, Alicia ; Yang, Wan. In: PLOS Computational Biology. RePEc:plo:pcbi00:1003583.

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5
432008Noise Propagation and Signaling Sensitivity in Biological Networks: A Role for Positive Feedback. (2008). Barkai, Naama ; Hornung, Gil. In: PLOS Computational Biology. RePEc:plo:pcbi00:0040008.

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5
442008Hierarchical Models in the Brain. (2008). Friston, Karl. In: PLOS Computational Biology. RePEc:plo:pcbi00:1000211.

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5
452006Optimal Noise Filtering in the Chemotactic Response of Escherichia coli. (2006). Iglesias, Pablo A ; Yi, Tau-Mu ; Andrews, Burton W. In: PLOS Computational Biology. RePEc:plo:pcbi00:0020154.

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5
462010Mathematical Modelling of Cell-Fate Decision in Response to Death Receptor Engagement. (2010). Barillot, Emmanuel ; Zhivotovsky, Boris ; Thieffry, Denis ; Fourquet, Simon ; Tournier, Laurent ; Calzone, Laurence ; Zinovyev, Andrei. In: PLOS Computational Biology. RePEc:plo:pcbi00:1000702.

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5
472013The RAVEN Toolbox and Its Use for Generating a Genome-scale Metabolic Model for Penicillium chrysogenum. (2013). Nielsen, Jens ; Nookaew, Intawat ; Vongsangnak, Wanwipa ; Shoaie, Saeed ; Liu, Liming ; Agren, Rasmus. In: PLOS Computational Biology. RePEc:plo:pcbi00:1002980.

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5
482008A Hierarchy of Time-Scales and the Brain. (2008). Friston, Karl J ; Daunizeau, Jean ; Kiebel, Stefan J. In: PLOS Computational Biology. RePEc:plo:pcbi00:1000209.

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5
492008Optimal Compensation for Temporal Uncertainty in Movement Planning. (2008). Landy, Michael S ; Maloney, Laurence T ; Hudson, Todd E. In: PLOS Computational Biology. RePEc:plo:pcbi00:1000130.

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5
502015The Sense of Confidence during Probabilistic Learning: A Normative Account. (2015). Dehaene, Stanislas ; Schlunegger, Daniel ; Meyniel, Florent. In: PLOS Computational Biology. RePEc:plo:pcbi00:1004305.

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5
50 most relevant documents in this series (papers most cited in the last two years)
#YearTitleCited
12007Universally Sloppy Parameter Sensitivities in Systems Biology Models. (2007). Sethna, James P ; Myers, Christopher R ; Brown, Kevin S ; Casey, Fergal P ; Waterfall, Joshua J ; Gutenkunst, Ryan N. In: PLOS Computational Biology. RePEc:plo:pcbi00:0030189.

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5
22015The Sense of Confidence during Probabilistic Learning: A Normative Account. (2015). Dehaene, Stanislas ; Schlunegger, Daniel ; Meyniel, Florent. In: PLOS Computational Biology. RePEc:plo:pcbi00:1004305.

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5
32013Ten Simple Rules for Reproducible Computational Research. (2013). Hovig, Eivind ; Taylor, James ; Nekrutenko, Anton ; Sandve, Geir Kjetil. In: PLOS Computational Biology. RePEc:plo:pcbi00:1003285.

Full description at Econpapers || Download paper

4
42015Combining Search, Social Media, and Traditional Data Sources to Improve Influenza Surveillance. (2015). Brownstein, John S ; Nsoesie, Elaine O ; Paul, Michael J ; Dredze, Mark ; Nguyen, Andre T ; Santillana, Mauricio. In: PLOS Computational Biology. RePEc:plo:pcbi00:1004513.

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4
52011Ten Simple Rules for Building and Maintaining a Scientific Reputation. (2011). Barbour, Virginia ; Bourne, Philip E. In: PLOS Computational Biology. RePEc:plo:pcbi00:1002108.

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3
62017Good enough practices in scientific computing. (2017). Teal, Tracy K ; Nederbragt, Lex ; Kitzes, Justin ; Cranston, Karen ; Bryan, Jennifer ; Wilson, Greg. In: PLOS Computational Biology. RePEc:plo:pcbi00:1005510.

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3
72012A Range-Normalization Model of Context-Dependent Choice: A New Model and Evidence. (2012). Camerer, Colin ; de Martino, Benedetto ; Soltani, Alireza. In: PLOS Computational Biology. RePEc:plo:pcbi00:1002607.

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3
82010Associating Genes and Protein Complexes with Disease via Network Propagation. (2010). Sharan, Roded ; Shlomi, Tomer ; Ruppin, Eytan ; Magger, Oded ; Vanunu, Oron. In: PLOS Computational Biology. RePEc:plo:pcbi00:1000641.

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3
92018Nonmechanistic forecasts of seasonal influenza with iterative one-week-ahead distributions. (2018). Rosenfeld, Roni ; Tibshirani, Ryan J ; Hyun, Sangwon ; Farrow, David C ; Brooks, Logan C. In: PLOS Computational Biology. RePEc:plo:pcbi00:1006134.

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3
102014On the Origins of Suboptimality in Human Probabilistic Inference. (2014). Wolpert, Daniel M ; Vijayakumar, Sethu ; Acerbi, Luigi. In: PLOS Computational Biology. RePEc:plo:pcbi00:1003661.

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3
112006Cooperation Prevails When Individuals Adjust Their Social Ties. (2006). Lenaerts, Tom ; Pacheco, Jorge M ; Santos, Francisco C. In: PLOS Computational Biology. RePEc:plo:pcbi00:0020140.

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3
122015Emergence of Shared Intentionality Is Coupled to the Advance of Cumulative Culture. (2015). Newton, Jonathan ; Angus, Simon D. In: PLOS Computational Biology. RePEc:plo:pcbi00:1004587.

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3
132018Prediction of infectious disease epidemics via weighted density ensembles. (2018). Reich, Nicholas G ; Ray, Evan L. In: PLOS Computational Biology. RePEc:plo:pcbi00:1005910.

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3
142011A Stochastic Model of Latently Infected Cell Reactivation and Viral Blip Generation in Treated HIV Patients. (2011). Coombs, Daniel ; Conway, Jessica M. In: PLOS Computational Biology. RePEc:plo:pcbi00:1002033.

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2
152008The Dynamic Brain: From Spiking Neurons to Neural Masses and Cortical Fields. (2008). Friston, Karl ; Breakspear, Michael ; Robinson, Peter A ; Jirsa, Viktor K ; Deco, Gustavo. In: PLOS Computational Biology. RePEc:plo:pcbi00:1000092.

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2
162011A Comprehensive Model of the Spatio-Temporal Stem Cell and Tissue Organisation in the Intestinal Crypt. (2011). Loeffler, Markus ; Clevers, Hans ; Aust, Gabriela ; Barker, Nick ; Galle, Jorg ; Buske, Peter. In: PLOS Computational Biology. RePEc:plo:pcbi00:1001045.

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2
172014On the Use of Human Mobility Proxies for Modeling Epidemics. (2014). Blondel, Vincent ; Schneider, Christian M ; Kam, Guillaume Kon ; Decuyper, Adeline ; Bajardi, Paolo ; Tizzoni, Michele ; Colizza, Vittoria ; Gonzalez, Marta C ; Smoreda, Zbigniew. In: PLOS Computational Biology. RePEc:plo:pcbi00:1003716.

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2
182016The Computational Properties of a Simplified Cortical Column Model. (2016). Mihalas, Stefan ; Koch, Christof ; Iyer, Ramakrishnan ; Cain, Nicholas . In: PLOS Computational Biology. RePEc:plo:pcbi00:1005045.

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2
192014Mechanical Cell-Matrix Feedback Explains Pairwise and Collective Endothelial Cell Behavior In Vitro. (2014). , Roeland ; Reinhart-King, Cynthia A ; Lavalley, Danielle J ; Rens, Elisabeth G. In: PLOS Computational Biology. RePEc:plo:pcbi00:1003774.

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2
202013Exploring Protein-Peptide Binding Specificity through Computational Peptide Screening. (2013). Wallin, Stefan ; Bhattacherjee, Arnab. In: PLOS Computational Biology. RePEc:plo:pcbi00:1003277.

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2
212016An Introduction to Programming for Bioscientists: A Python-Based Primer. (2016). Mura, Cameron ; McAnany, Charles E ; Ekmekci, Berk. In: PLOS Computational Biology. RePEc:plo:pcbi00:1004867.

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2
222007Ten Simple Rules for Making Good Oral Presentations. (2007). Bourne, Philip E. In: PLOS Computational Biology. RePEc:plo:pcbi00:0030077.

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2
232014Pattern of Tick Aggregation on Mice: Larger Than Expected Distribution Tail Enhances the Spread of Tick-Borne Pathogens. (2014). Tagliapietra, Valentina ; Bolzoni, Luca ; Bertolotti, Luigi ; Bajardi, Paolo ; Giacobini, Mario ; Ferreri, Luca ; Rosa, Roberto ; Rizzoli, Annapaola. In: PLOS Computational Biology. RePEc:plo:pcbi00:1003931.

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2
242015ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes. (2015). Wilson, Daniel J ; Didelot, Xavier. In: PLOS Computational Biology. RePEc:plo:pcbi00:1004041.

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2
252009Semantic Similarity in Biomedical Ontologies. (2009). Couto, Francisco M ; Lord, Phillip ; Falco, Andre O ; Faria, Daniel ; Pesquita, Catia. In: PLOS Computational Biology. RePEc:plo:pcbi00:1000443.

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2
262011Learning from Sensory and Reward Prediction Errors during Motor Adaptation. (2011). Shadmehr, Reza ; Izawa, Jun. In: PLOS Computational Biology. RePEc:plo:pcbi00:1002012.

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2
272009Towards Reproducible Descriptions of Neuronal Network Models. (2009). Plesser, Hans Ekkehard ; Gewaltig, Marc-Oliver ; Nordlie, Eilen. In: PLOS Computational Biology. RePEc:plo:pcbi00:1000456.

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2
282013The RAVEN Toolbox and Its Use for Generating a Genome-scale Metabolic Model for Penicillium chrysogenum. (2013). Nielsen, Jens ; Nookaew, Intawat ; Vongsangnak, Wanwipa ; Shoaie, Saeed ; Liu, Liming ; Agren, Rasmus. In: PLOS Computational Biology. RePEc:plo:pcbi00:1002980.

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2
292011Second Order Dimensionality Reduction Using Minimum and Maximum Mutual Information Models. (2011). Sharpee, Tatyana O ; Sincich, Lawrence C ; Rowekamp, Ryan J ; Fitzgerald, Jeffrey D. In: PLOS Computational Biology. RePEc:plo:pcbi00:1002249.

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2
302010Probability Matching as a Computational Strategy Used in Perception. (2010). Shams, Ladan ; Beierholm, Ulrik R ; Wozny, David R. In: PLOS Computational Biology. RePEc:plo:pcbi00:1000871.

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2
312015Doubly Bayesian Analysis of Confidence in Perceptual Decision-Making. (2015). Latham, Peter E ; Bahrami, Bahador ; Bang, Dan ; Aitchison, Laurence. In: PLOS Computational Biology. RePEc:plo:pcbi00:1004519.

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2
322015Ten Simple Rules for a Computational Biologist’s Laboratory Notebook. (2015). Schnell, Santiago. In: PLOS Computational Biology. RePEc:plo:pcbi00:1004385.

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2
332016Scaling Properties of Dimensionality Reduction for Neural Populations and Network Models. (2016). Smith, Matthew A ; Kohn, Adam ; Doiron, Brent ; Litwin-Kumar, Ashok ; Cowley, Benjamin R ; Williamson, Ryan C ; Yu, Byron M. In: PLOS Computational Biology. RePEc:plo:pcbi00:1005141.

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2
342006Ten Simple Rules for Selecting a Postdoctoral Position. (2006). Friedberg, Iddo ; Bourne, Philip E. In: PLOS Computational Biology. RePEc:plo:pcbi00:0020121.

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352015A Common Mechanism Underlying Food Choice and Social Decisions. (2015). Fehr, Ernst ; Morishima, Yosuke ; Bartling, Bjorn ; Hare, Todd ; Krajbich, Ian . In: PLOS Computational Biology. RePEc:plo:pcbi00:1004371.

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362016Ten Simple Rules for Effective Statistical Practice. (2016). Reid, Nancy ; Yu, Bin ; Meng, Xiao-Li ; Davidian, Marie ; Caffo, Brian S ; Kass, Robert E. In: PLOS Computational Biology. RePEc:plo:pcbi00:1004961.

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372016Estimation of Directed Effective Connectivity from fMRI Functional Connectivity Hints at Asymmetries of Cortical Connectome. (2016). Deco, Gustavo ; Ritter, Petra ; Ponce-Alvarez, Adrian ; Moreno-Bote, Ruben ; Gilson, Matthieu. In: PLOS Computational Biology. RePEc:plo:pcbi00:1004762.

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382013Ten Simple Rules for Writing a Literature Review. (2013). Pautasso, Marco. In: PLOS Computational Biology. RePEc:plo:pcbi00:1003149.

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392016Persistent Chaos of Measles Epidemics in the Prevaccination United States Caused by a Small Change in Seasonal Transmission Patterns. (2016). Grenfell, Bryan T ; Jessica, C ; Burke, Donald S ; van Panhuis, Willem G ; Bjornstad, Ottar N ; Dalziel, Benjamin D. In: PLOS Computational Biology. RePEc:plo:pcbi00:1004655.

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402008Noise during Rest Enables the Exploration of the Brains Dynamic Repertoire. (2008). Jirsa, V K ; Kotter, R ; McIntosh, A R ; Rho, Y ; Ghosh, Anandamohan . In: PLOS Computational Biology. RePEc:plo:pcbi00:1000196.

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412014VBA: A Probabilistic Treatment of Nonlinear Models for Neurobiological and Behavioural Data. (2014). Rigoux, Lionel ; Adam, Vincent ; Daunizeau, Jean. In: PLOS Computational Biology. RePEc:plo:pcbi00:1003441.

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422012Optimizing Provider Recruitment for Influenza Surveillance Networks. (2012). Meyers, Lauren Ancel ; Dimitrov, Nedialko B ; Scarpino, Samuel V. In: PLOS Computational Biology. RePEc:plo:pcbi00:1002472.

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432011Inference for Nonlinear Epidemiological Models Using Genealogies and Time Series. (2011). Koelle, Katia ; Ratmann, Oliver ; Rasmussen, David A. In: PLOS Computational Biology. RePEc:plo:pcbi00:1002136.

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442010Neighbor-Dependent Ramachandran Probability Distributions of Amino Acids Developed from a Hierarchical Dirichlet Process Model. (2010). Dunbrack, Roland L ; Jordan, Michael I ; Mitra, Rajib ; Shapovalov, Maxim ; Wang, Guoli ; Ting, Daniel. In: PLOS Computational Biology. RePEc:plo:pcbi00:1000763.

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452018Anticipating epidemic transitions with imperfect data. (2018). Rohani, Pejman ; Drake, John M ; Park, Andrew W ; Miller, Paige B ; Marty, Eric ; Odea, Eamon B ; Brett, Tobias S. In: PLOS Computational Biology. RePEc:plo:pcbi00:1006204.

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462014The Sign Rule and Beyond: Boundary Effects, Flexibility, and Noise Correlations in Neural Population Codes. (2014). Shea-Brown, Eric ; Zylberberg, Joel ; Hu, YU. In: PLOS Computational Biology. RePEc:plo:pcbi00:1003469.

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472012Ten Simple Rules for the Open Development of Scientific Software. (2012). Procter, James B ; Prli, Andreas. In: PLOS Computational Biology. RePEc:plo:pcbi00:1002802.

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482016Evolution of Cooperation in Social Dilemmas on Complex Networks. (2016). Killingback, Timothy ; Iyer, Swami. In: PLOS Computational Biology. RePEc:plo:pcbi00:1004779.

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492014Optimism as a Prior Belief about the Probability of Future Reward. (2014). Series, Peggy ; Kalra, Aditi ; Stankevicius, Aistis. In: PLOS Computational Biology. RePEc:plo:pcbi00:1003605.

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502017Individual versus superensemble forecasts of seasonal influenza outbreaks in the United States. (2017). Shaman, Jeffrey ; Kandula, Sasikiran ; Yamana, Teresa K. In: PLOS Computational Biology. RePEc:plo:pcbi00:1005801.

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Citing documents used to compute impact factor: 43
YearTitle
2019Ten simple rules for providing a meaningful research experience to high school students. (2019). Das, Subhamoy ; Collu, Giovanna M ; Oneill, Kate M ; Lescak, Emily A. In: PLOS Computational Biology. RePEc:plo:pcbi00:1006920.

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2019Assessing the performance of real-time epidemic forecasts: A case study of Ebola in the Western Area region of Sierra Leone, 2014-15. (2019). Edmunds, John W ; Eggo, Rosalind M ; Lowe, Rachel ; Kucharski, Adam J ; Camacho, Anton ; Funk, Sebastian. In: PLOS Computational Biology. RePEc:plo:pcbi00:1006785.

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2019Computational geometry for modeling neural populations: From visualization to simulation. (2019). Lai, Yi Ming ; Lepperod, Mikkel ; de Kamps, Marc . In: PLOS Computational Biology. RePEc:plo:pcbi00:1006729.

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2019Bayesian inference of neuronal assemblies. (2019). Meyer, Martin P ; Thomas, ; Diana, Giovanni. In: PLOS Computational Biology. RePEc:plo:pcbi00:1007481.

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2019Adaptive multi-view multi-label learning for identifying disease-associated candidate miRNAs. (2019). Luo, Jiawei ; Yu, Shengpeng ; Liang, Cheng . In: PLOS Computational Biology. RePEc:plo:pcbi00:1006931.

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2019Modeling metabolic networks of individual bacterial agents in heterogeneous and dynamic soil habitats (IndiMeSH). (2019). Or, Dani ; Hatzimanikatis, Vassily ; Ataman, Meri ; Borer, Benedict. In: PLOS Computational Biology. RePEc:plo:pcbi00:1007127.

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2019No substantial change in the balance between model-free and model-based control via training on the two-step task. (2019). Holper, Lisa ; Economides, Marcos ; Bach, Dominik R ; Grosskurth, Elmar D. In: PLOS Computational Biology. RePEc:plo:pcbi00:1007443.

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2019ChIPulate: A comprehensive ChIP-seq simulation pipeline. (2019). Siddharthan, Rahul ; Hannenhalli, Sridhar ; Datta, Vishaka. In: PLOS Computational Biology. RePEc:plo:pcbi00:1006921.

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2019Crispr/Cas9 Target Prediction with Deep Learning. (2019). Ensari, Tolga ; Doaan, Elif ; Akta, Zlem. In: Biomedical Journal of Scientific & Technical Research. RePEc:abf:journl:v:21:y:2019:i:5:p:16131-16135.

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2019Simple models of quantitative firing phenotypes in hippocampal neurons: Comprehensive coverage of intrinsic diversity. (2019). Ascoli, Giorgio A ; Hamilton, David J ; Wheeler, Diek W ; Komendantov, Alexander O ; Venkadesh, Siva. In: PLOS Computational Biology. RePEc:plo:pcbi00:1007462.

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2019The gradient of the reinforcement landscape influences sensorimotor learning. (2019). Gribble, Paul L ; McGregor, Heather R ; Coltman, Susan K ; Palidis, Dimitrios J ; Lao, Christopher K. In: PLOS Computational Biology. RePEc:plo:pcbi00:1006839.

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2019Ten simple rules for writing and sharing computational analyses in Jupyter Notebooks. (2019). Rose, Peter W ; Perez, Fernando ; Rosenthal, Sara Brin ; Nguyen, Mai H ; Moshiri, Niema ; Knight, Rob ; Huang, Shih-Cheng ; Altintas, Ilkay ; Zuniga, Cristal ; Birmingham, Amanda ; Rule, Adam. In: PLOS Computational Biology. RePEc:plo:pcbi00:1007007.

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2019The effect of inhibition on rate code efficiency indicators. (2019). Kostal, Lubomir ; Barta, Tomas. In: PLOS Computational Biology. RePEc:plo:pcbi00:1007545.

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2019Executable pathway analysis using ensemble discrete-state modeling for large-scale data. (2019). Thakar, Juilee ; Palshikar, Mukta G ; Palli, Rohith. In: PLOS Computational Biology. RePEc:plo:pcbi00:1007317.

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2019Sour grapes and sweet victories: How actions shape preferences. (2019). Pessiglione, Mathias ; Daunizeau, Jean ; Bourgeois-Gironde, Sacha ; Hu, Chen ; Kurniawan, Irma T ; Rigoux, Lionel ; Vinckier, Fabien. In: PLOS Computational Biology. RePEc:plo:pcbi00:1006499.

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2019Parameter estimation and identifiability in a neural population model for electro-cortical activity. (2019). Hicks, Damien G ; David, ; Cadusch, Peter J ; Hartoyo, Agus. In: PLOS Computational Biology. RePEc:plo:pcbi00:1006694.

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2019Forecasting national and regional influenza-like illness for the USA. (2019). Riley, Steven ; Bacon, David P ; Turtle, James ; Ben-Nun, Michal. In: PLOS Computational Biology. RePEc:plo:pcbi00:1007013.

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2019Forecasting dengue and influenza incidences using a sparse representation of Google trends, electronic health records, and time series data. (2019). Marathe, Madhav ; Mody, Sandeep K ; Rangarajan, Prashant. In: PLOS Computational Biology. RePEc:plo:pcbi00:1007518.

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2019Arrhythmia mechanisms and spontaneous calcium release: Bi-directional coupling between re-entrant and focal excitation. (2019). Colman, Michael A. In: PLOS Computational Biology. RePEc:plo:pcbi00:1007260.

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2019Fast uncertainty quantification for dynamic flux balance analysis using non-smooth polynomial chaos expansions. (2019). Mesbah, Ali ; Martin-Casas, Marc ; Paulson, Joel A. In: PLOS Computational Biology. RePEc:plo:pcbi00:1007308.

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2019Learning to synchronize: How biological agents can couple neural task modules for dealing with the stability-plasticity dilemma. (2019). Verguts, Tom ; Verbeke, Pieter. In: PLOS Computational Biology. RePEc:plo:pcbi00:1006604.

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2019EternaBrain: Automated RNA design through move sets and strategies from an Internet-scale RNA videogame. (2019). Das, Rhiju ; Participants, Eterna ; Portela, Fernando ; Coppess, Katherine R ; Keep, Benjamin ; Koodli, Rohan V. In: PLOS Computational Biology. RePEc:plo:pcbi00:1007059.

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2019Imperfect Bayesian inference in visual perception. (2019). van den Berg, Ronald ; Stengrd, Elina. In: PLOS Computational Biology. RePEc:plo:pcbi00:1006465.

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2019The statistics of epidemic transitions. (2019). Park, Andrew W ; Oregan, Suzanne M ; Odea, Eamon B ; Miller, Paige B ; Marty, Eric ; Ferrari, Matthew J ; Epureanu, Bogdan I ; Chen, Shiyang ; Brett, Tobias S ; Rohani, Pejman ; Drake, John M. In: PLOS Computational Biology. RePEc:plo:pcbi00:1006917.

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2019Optimizing the depth and the direction of prospective planning using information values. (2019). Keramati, Mehdi ; Dezfouli, Amir ; Sezener, Can Eren. In: PLOS Computational Biology. RePEc:plo:pcbi00:1006827.

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2019An empirical approach to demographic inference with genomic data. (2019). Ralph, Peter L. In: Theoretical Population Biology. RePEc:eee:thpobi:v:127:y:2019:i:c:p:91-101.

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2019Improving the reliability of model-based decision-making estimates in the two-stage decision task with reaction-times and drift-diffusion modeling. (2019). Dolan, Raymond J ; Consortium, Nspn ; Keramati, Mehdi ; Moran, Rani ; Moutoussis, Michael ; Hauser, Tobias U ; Shahar, Nitzan. In: PLOS Computational Biology. RePEc:plo:pcbi00:1006803.

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2019Phylogenies from dynamic networks. (2019). Colijn, Caroline ; Bezemer, Daniela ; Ratmann, Oliver ; Metzig, Cornelia . In: PLOS Computational Biology. RePEc:plo:pcbi00:1006761.

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2019Ten simple rules for giving an effective academic job talk. (2019). Mummah, Riley O ; Mooney, Jazlyn ; Miller, Julie S ; Kandlikar, Gaurav S ; Juhn, Mark ; Beichman, Annabel C ; Guerra, Eduardo C ; Ambrose, Monique R ; Lloyd-Smith, James O ; Lohmueller, Kirk E ; Sura, Shayna A. In: PLOS Computational Biology. RePEc:plo:pcbi00:1007163.

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2019Coordination over a unique medium of exchange under information scarcity. (2019). Bourgeois-Gironde, Sacha ; Rougier, Nicolas P ; Boraud, Thomas ; Lefebvre, Germain ; Garcia, Basile ; Nioche, Aurelien. In: Palgrave Communications. RePEc:pal:palcom:v:5:y:2019:i:1:d:10.1057_s41599-019-0362-2.

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2019Cost-benefit trade-offs in decision-making and learning. (2019). Chambon, Valerian ; Palminteri, Stefano ; Sidarus, Nura. In: PLOS Computational Biology. RePEc:plo:pcbi00:1007326.

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2019Reappraising the utility of Google Flu Trends. (2019). Shaman, Jeffrey ; Kandula, Sasikiran. In: PLOS Computational Biology. RePEc:plo:pcbi00:1007258.

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2019Evaluation of parameters affecting performance and reliability of machine learning-based antibiotic susceptibility testing from whole genome sequencing data. (2019). Grad, Yonatan H ; Harris, Simon R ; Rakeman, Jennifer L ; Sanchez-Buso, Leonor ; Wheeler, Nicole ; Hicks, Allison L. In: PLOS Computational Biology. RePEc:plo:pcbi00:1007349.

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2019Rapid interpretation of small-angle X-ray scattering data. (2019). Schug, Alexander ; Reinartz, Ines ; Weiel, Marie. In: PLOS Computational Biology. RePEc:plo:pcbi00:1006900.

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2019Prediction of VRC01 neutralization sensitivity by HIV-1 gp160 sequence features. (2019). Simpkins, Christopher ; Carone, Marco ; Gilbert, Peter B ; Simon, Noah ; Edugupanti, Srilatha ; Dingens, Adam S ; Mgodi, Nyaradzo M ; Setliff, Ian ; Karuna, Shelly ; Georgiev, Ivelin S ; Edlefsen, Paul T ; Carpp, Lindsay N ; Juraska, Michal ; Borate, Bhavesh R ; Yu, Wen-Han ; Williamson, Brian D ; Alter, Galit ; Benkeser, David C ; Montefiori, David ; Magaret, Craig A. In: PLOS Computational Biology. RePEc:plo:pcbi00:1006952.

Full description at Econpapers || Download Close spatial arrangement of mutants favors and disfavors fixation. (2019). Wu, Bin ; Xiao, Yunming. In: PLOS Computational Biology. RePEc:plo:pcbi00:1007212.

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2019Representational structure or task structure? Bias in neural representational similarity analysis and a Bayesian method for reducing bias. (2019). Niv, Yael ; Pillow, Jonathan W ; Schuck, Nicolas W ; Bo, Ming. In: PLOS Computational Biology. RePEc:plo:pcbi00:1006299.

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2019Identifying nonlinear dynamical systems via generative recurrent neural networks with applications to fMRI. (2019). Durstewitz, Daniel ; Lis, Stefanie ; Kirsch, Peter ; Toutounji, Hazem ; Koppe, Georgia. In: PLOS Computational Biology. RePEc:plo:pcbi00:1007263.

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2019FAMoS: A Flexible and dynamic Algorithm for Model Selection to analyse complex systems dynamics. (2019). Graw, Frederik ; Fackler, Oliver T ; Imle, Andrea ; Hohl, Tobias ; Gabel, Michael. In: PLOS Computational Biology. RePEc:plo:pcbi00:1007230.

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2019Accuracy of real-time multi-model ensemble forecasts for seasonal influenza in the U.S.. (2019). Brooks, Logan C ; Kandula, Sasikiran ; Osthus, Dave ; Shaman, Jeffrey ; Ray, Evan L ; Rosenfeld, Roni ; Tushar, Abhinav ; Johansson, Michael A ; Yamana, Teresa K ; Biggerstaff, Matthew ; McGowan, Craig J ; Silva, Rebecca ; Reich, Nicholas G ; Moore, Evan ; Gibson, Graham Casey ; Crawford-Crudell, Willow. In: PLOS Computational Biology. RePEc:plo:pcbi00:1007486.

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2019A mechanistic integrative computational model of macrophage polarization: Implications in human pathophysiology. (2019). Popel, Aleksander S ; Annex, Brian H ; Medeiros, Thalyta X ; Sove, Richard J ; Mirando, Adam C ; Zhao, Chen. In: PLOS Computational Biology. RePEc:plo:pcbi00:1007468.

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2019Statistics of correlated percolation in a bacterial community. (2019). Mugler, Andrew ; Suel, Gurol M ; Roy, Ushasi ; Redford, Samuel E ; Kikuchi, Kaito ; Larkin, Joseph W ; Zhai, Xiaoling. In: PLOS Computational Biology. RePEc:plo:pcbi00:1007508.

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2019CoPhosK: A method for comprehensive kinase substrate annotation using co-phosphorylation analysis. (2019). Chance, Mark R ; Koyuturk, Mehmet ; Li, Ming ; Maxwell, Sean ; Schlatzer, Daniela ; Wiredja, Danica ; Ayati, Marzieh. In: PLOS Computational Biology. RePEc:plo:pcbi00:1006678.

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Recent citations
Recent citations received in 2019

YearCiting document
2019Wisdom of crowds in computational biology. (2019). Gabhann, Feilim Mac ; Papin, Jason A. In: PLOS Computational Biology. RePEc:plo:pcbi00:1007032.

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2019Learning the structure of the world: The adaptive nature of state-space and action representations in multi-stage decision-making. (2019). Balleine, Bernard W ; Dezfouli, Amir. In: PLOS Computational Biology. RePEc:plo:pcbi00:1007334.

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Recent citations received in 2018

YearCiting document
2018The effect of cell geometry on polarization in budding yeast. (2018). Petzold, Linda R ; Campas, Otger ; Yi, Tau-Mu ; Banavar, Samhita P ; Gomez, Carlos ; Drawert, Brian ; Trogdon, Michael. In: PLOS Computational Biology. RePEc:plo:pcbi00:1006241.

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Recent citations received in 2017

YearCiting document
2017A state space approach for piecewise-linear recurrent neural networks for identifying computational dynamics from neural measurements. (2017). Durstewitz, Daniel. In: PLOS Computational Biology. RePEc:plo:pcbi00:1005542.

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2017Multi-scale approaches for high-speed imaging and analysis of large neural populations. (2017). Yuste, Rafael ; Ahrens, Misha B ; Mu, YU ; Soudry, Daniel ; Yang, Weijian ; Friedrich, Johannes ; Paninski, Liam ; Peterka, Darcy S. In: PLOS Computational Biology. RePEc:plo:pcbi00:1005685.

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2017Identifying parameter regions for multistationarity. (2017). Wiuf, Carsten ; Mincheva, Maya ; Feliu, Elisenda ; Conradi, Carsten . In: PLOS Computational Biology. RePEc:plo:pcbi00:1005751.

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2017Ten simple rules for international short-term research stays. (2017). Patrinos, George P ; Lopez-Leon, Sandra ; Forero, Diego A. In: PLOS Computational Biology. RePEc:plo:pcbi00:1005832.

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2017Cell cycle time series gene expression data encoded as cyclic attractors in Hopfield systems. (2017). Piermarocchi, Carlo ; Paternostro, Giovanni ; Smith, Nicholas ; Sims, Spencer ; Szedlak, Anthony. In: PLOS Computational Biology. RePEc:plo:pcbi00:1005849.

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Recent citations received in 2016

YearCiting document
2016Inferring Contacting Residues within and between Proteins: What Do the Probabilities Mean?. (2016). van Nimwegen, Erik. In: PLOS Computational Biology. RePEc:plo:pcbi00:1004726.

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2016The Maximum Entropy Fallacy Redux?. (2016). Aurell, Erik. In: PLOS Computational Biology. RePEc:plo:pcbi00:1004777.

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2016Population Density Modulates Drug Inhibition and Gives Rise to Potential Bistability of Treatment Outcomes for Bacterial Infections. (2016). Wood, Kevin B ; Brumm, Peter ; Maltas, Jeff ; Karslake, Jason. In: PLOS Computational Biology. RePEc:plo:pcbi00:1005098.

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2016Improved Measures of Integrated Information. (2016). Tegmark, Max . In: PLOS Computational Biology. RePEc:plo:pcbi00:1005123.

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2016NullSeq: A Tool for Generating Random Coding Sequences with Desired Amino Acid and GC Contents. (2016). , Luis ; Luis , ; Jewett, Michael C ; Lancichinetti, Andrea ; Hockenberry, Adam J ; Liu, Sophia S. In: PLOS Computational Biology. RePEc:plo:pcbi00:1005184.

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2016Drivers of Inter-individual Variation in Dengue Viral Load Dynamics. (2016). Koelle, Katia ; Schmidler, Scott ; Ben-Shachar, Rotem. In: PLOS Computational Biology. RePEc:plo:pcbi00:1005194.

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